HHsearch alignment for GI: 254780684 and conserved domain: TIGR02324
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL; InterPro: IPR012701 Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three-component ABC transporter, where IPR005769 from INTERPRO is the permease, IPR005770 from INTERPRO is the phosphonates binding protein, and IPR012693 from INTERPRO is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lyase complex. This protein (PhnL) and the adjacent-encoded PhnK (IPR012700 from INTERPRO) resemble transporter ATP-binding proteins but are suggested, based on mutagenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se ..
Probab=94.24 E-value=0.035 Score=34.92 Aligned_cols=112 Identities=24% Similarity=0.298 Sum_probs=58.7
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHH-HHC-CCCCEEEEECC-------CCCHHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 520022358503752667889999999987-407-89838993124-------652238899998642775532898415
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFA-RSD-CFDKVIISLVG-------ERGREVREFIEDYLGDNLKKSVVVVAT 223 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~-~~~-~~dv~V~alIG-------eR~rev~efi~~~~~~~l~~tvvv~~t 223 (438)
T Consensus 26 ~v~l~V~aGEcv~L~G~SGaGKSTlLk~lYaNYlp~~G~i~~~H~G~~~DL~~a~pr~vl~vR--------r~tiGYVSQ 97 (224)
T TIGR02324 26 NVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASPREVLEVR--------RKTIGYVSQ 97 (224)
T ss_pred CCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHH--------HHHCCCEEE
T ss_conf 743787367358853688876789999766304746867777624047675076845778773--------003351555
Q ss_pred CCCCHHHHHHHHH-HHHH-HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCC--CCCCC-CCCCHHHHH
Q ss_conf 7788034444445-6777-8888642679889997098999999876654047--78432-366324554
Q gi|254780684|r 224 SDESPILRKMAPL-TAVT-IAEYFSSKGDNVLLILDSITRFAHSIREIATNSG--ELPVA-RGYPTSVFS 288 (438)
Q Consensus 224 ~d~~~~~r~~a~~-~a~~-iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~g--e~P~~-~gyp~~~~~ 288 (438)
T Consensus 98 F-----LRV-iPRvsalevV~ePL~~~G~----------~~~~A~~~A~~LL~rLniPERLW~LpPaTFS 151 (224)
T TIGR02324 98 F-----LRV-IPRVSALEVVAEPLLERGV----------PREAARARARELLARLNIPERLWSLPPATFS 151 (224)
T ss_pred E-----EEE-CCCCCHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
T ss_conf 3-----031-2886728888787987289----------5899999999999755740244288788656