HHsearch alignment for GI: 254780684 and conserved domain: TIGR02545
>TIGR02545 ATP_syn_fliI flagellar protein export ATPase FliI; InterPro: IPR013379 FliI proteins are involved in bacterial flagellum systems, acting to drive protein export for flagellar biosynthesis. The most closely related proteins are the YscN proteins of bacterial type III secretion systems.; GO: 0016887 ATPase activity, 0001539 ciliary or flagellar motility, 0009296 flagellum biogenesis, 0009288 flagellin-based flagellum.
Probab=100.00 E-value=0 Score=1159.12 Aligned_cols=415 Identities=45% Similarity=0.711 Sum_probs=394.6
Q ss_pred EEEEEEEEEECCEEEEECCCCCCCC---CCEEEEECC-C---CCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECC--
Q ss_conf 2012899995258999826888873---518999569-9---607999997419979999804855746788899728--
Q gi|254780684|r 21 VQGGYISSITSVYYTVTCLSQYVCL---GDFVVHQGK-N---SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-- 91 (438)
Q Consensus 21 ~~~G~V~~V~G~ii~v~Gl~~~v~i---Gelv~i~~~-~---~~v~geVi~~~~~~~~l~~~~~~~gI~~G~~V~~~g-- 91 (438)
T Consensus 2 ~~~G~V~~v~G~~~e~~Gp--~~~~~~~G~~c~i~~~~~g~~~~~~aEVvGF~~~~~~lmP~~~~~Gi~~G~~V~~~~~~ 79 (439)
T TIGR02545 2 RIVGRVTKVAGLTVEVAGP--KAAVARLGDLCEIEPQEGGEEKHVLAEVVGFEGDRVILMPYEPLEGIRPGDRVFLLGDI 79 (439)
T ss_pred CEEEEEEEEECCEEEEECC--CCCEEECCCEEEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCC
T ss_conf 1588999988438898544--21302136278996588852101568999873883698644655562457657863431
Q ss_pred -----C-CEEECCHHHHHHHHHHHHHHCCC---CCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf -----8-55524666886543077630478---87775553012112543330001331100111245875200223585
Q gi|254780684|r 92 -----R-FRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 (438)
Q Consensus 92 -----~-~~i~vG~~lLGRViD~lG~PlDg---~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQ 162 (438)
T Consensus 80 ad~~~~~~~~~~G~~LLGRv~D~lG~PlDg~G~~~~~~~~~~~~~l~~~~pnpl~R~rI~~~l~tGVRaId~lLT~GrGQ 159 (439)
T TIGR02545 80 ADAGGRSLSIPVGDELLGRVIDALGRPLDGKGAGGGLIDATVYRPLRREPPNPLDRRRIEEVLDTGVRAIDALLTIGRGQ 159 (439)
T ss_pred CCCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 46545664202774440323867878657877888766565555656783074678757861121231011103655641
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 0375266788999999998740789838993124652238899998642-775532898415778803444444567778
Q gi|254780684|r 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241 (438)
Q Consensus 163 R~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a~~i 241 (438)
T Consensus 160 R~GIFAGSGVGKSTLLGMiAr~t~ADV~VIALIGERGREV~EFiE~~LG~eGl~kSVVVVATSD~spl~R~~aA~~A~~i 239 (439)
T TIGR02545 160 RLGIFAGSGVGKSTLLGMIARYTEADVNVIALIGERGREVKEFIEDDLGEEGLKKSVVVVATSDESPLMRIRAAYAATAI 239 (439)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 02663377444788988875066588789984446566431355430351102540799827998689998888999999
Q ss_pred HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHH--CCCCCCCCEEEEEEEEECCCC
Q ss_conf 888642679889997098999999876654047784323663245542004444431--136788523554333421676
Q gi|254780684|r 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDN 319 (438)
Q Consensus 242 AEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag--~~~~~~GSiT~~~~v~~~~dd 319 (438)
T Consensus 240 AEYFRDqGk~VLL~~DSlTRFAmAqREigLa~GEPP~tkGYpPSVF~~Lp~L~ERaG~~p~~~~~GsITa~yTVLVeGDD 319 (439)
T TIGR02545 240 AEYFRDQGKDVLLLMDSLTRFAMAQREIGLAAGEPPTTKGYPPSVFSELPRLLERAGIVPGAKGGGSITAFYTVLVEGDD 319 (439)
T ss_pred HHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 99998649834776211788998988999871787666789704899999999870864698887305689999873689
Q ss_pred CCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 42027899986126089870427758971311445640002212089999999999999999999999999852344699
Q gi|254780684|r 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 (438)
Q Consensus 320 ~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g~ 399 (438)
T Consensus 320 ~~ePiAD~~RgiLDGHIvLsR~lA~~G~YPaIDvl~SiSR~m~~i~~~e~~~~a~~~r~l~a~Y~~~eDLi~iGaY~~GS 399 (439)
T TIGR02545 320 MNEPIADAVRGILDGHIVLSRKLAERGHYPAIDVLRSISRLMPDIVSPEHNKAARKLRKLLATYKDAEDLIRIGAYKKGS 399 (439)
T ss_pred CCCHHHHHHHHHCCCEEEECHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98737877500102207732267645889875722227887776279889999999999999888889999817864688
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHC
Q ss_conf 98999999999999998359988899976-899999870
Q gi|254780684|r 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKKL 437 (438)
Q Consensus 400 d~~~d~~i~~~~~i~~fl~Q~~~e~~~~~-~~~~~~~~l 437 (438)
T Consensus 400 dp~~D~AI~~~p~i~~FL~Q~~~E~~~~~~~~~~L~~i~ 438 (439)
T TIGR02545 400 DPEVDKAIKLYPKIEAFLRQDIEEASSFEESLEALKEIL 438 (439)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 878999851002589984679754557789999999982