HHsearch alignment for GI: 254780684 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=96.58 E-value=0.027 Score=35.73 Aligned_cols=152 Identities=16% Similarity=0.264 Sum_probs=74.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 3752667889999999987407898389931246522388999986427-755328984157788034444445677788
Q gi|254780684|r 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242 (438)
Q Consensus 164 ~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~alIGeR~rev~efi~~~~~~-~l~~tvvv~~t~d~~~~~r~~a~~~a~~iA 242 (438)
T Consensus 46 ~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~lg~~~-----~~~~~~~~~~--------~l~ 112 (269)
T TIGR03015 46 ILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAADFGLET-----EGRDKAALLR--------ELE 112 (269)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC-----CCCCHHHHHH--------HHH
T ss_conf 999729989889999999984593454899976999999999999999859898-----8989999999--------999
Q ss_pred HHHH---HCCCCEEEEEECHHHHH-HHHHHHHHHCC-CCCCCCCCCHHHHHHCCHHHHHHHCC--CCCCCCEEEEEEEEE
Q ss_conf 8864---26798899970989999-99876654047-78432366324554200444443113--678852355433342
Q gi|254780684|r 243 EYFS---SKGDNVLLILDSITRFA-HSIREIATNSG-ELPVARGYPTSVFSELPRLLERIGPS--EKEKGNITAVISVLV 315 (438)
Q Consensus 243 Eyfr---~~G~~Vll~~Ds~tr~a-~A~reis~~~g-e~P~~~gyp~~~~~~~~~l~ERag~~--~~~~GSiT~~~~v~~ 315 (438)
T Consensus 113 ~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~~~-ll~iiL~GqpeL~~~L~~~~~~~l~qRI~~~~~L~p 191 (269)
T TIGR03015 113 DFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSNFQTDNAK-LLQIFLVGQPEFRETLQSPQLQQLRQRIIASCHLGP 191 (269)
T ss_pred HHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCCCC-CEEEEEECCHHHHHHHCCCCHHHHHHCEEEEEEECC
T ss_conf 9999999669946999724221999999999999701358887-048999578679998727402545550767998479
Q ss_pred C-CCCCCCHHHHHHH
Q ss_conf 1-6764202789998
Q gi|254780684|r 316 D-GDNHNDPIADSVR 329 (438)
Q Consensus 316 ~-~dd~~~pi~~~~~ 329 (438)
T Consensus 192 l~~eet~~YI~~RL~ 206 (269)
T TIGR03015 192 LDREETREYIEHRLE 206 (269)
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 998999999999998