HHsearch alignment for GI: 254780684 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=92.63 E-value=0.23 Score=28.91 Aligned_cols=41 Identities=34% Similarity=0.464 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 01112458752002-235850375266788999999998740
Q gi|254780684|r 144 GFKTGIRVIDIFTP-LCHGQRIGVFAGSGIGKSTLLSMFARS 184 (438)
Q Consensus 144 ~L~TGIr~ID~l~p-ig~GQR~gIfg~~GvGKt~Ll~~i~~~ 184 (438)
T Consensus 176 Gi~TG~~~LD~~~~Gl~~g~LiIiaARPsmGKTafalnia~n 217 (421)
T TIGR03600 176 GLSTGLPKLDRLTNGLVKGDLIVIGARPSMGKTTLALNIAEN 217 (421)
T ss_pred CCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf 787880789998369998868999854678745999999999