>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.

Probab=100.00 E-value=0 Score=730.63 Aligned_cols=267 Identities=33% Similarity=0.553 Sum_probs=258.2 Q ss_pred CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC Q ss_conf 55524666886543077630478877755530121125433300013311001112458752002235850375266788 Q gi|254780684|r 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 (438) Q Consensus 93 ~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQR~gIfg~~Gv 172 (438) T Consensus 2 l~VpVG~~lLGRVvd~lG~PiDg~~~i~~~-~~~~i~~~ap~p~~R~~v~e~l~TGIkaID~l~pig~GQR~gIfgg~Gv 80 (276) T cd01135 2 LKVPVSEDMLGRIFNGSGKPIDGGPEILAE-EYLDINGPPINPVARIYPEEMIQTGISAIDGMNTLVRGQKIPIFSGSGL 80 (276) T ss_pred EEEECCCCCCCCEECCCCCCCCCCCCCCCC-CEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCC T ss_conf 698747773374745883312799999998-6402458997804406778632258535405467236766332057886 Q ss_pred CHHHHHHHHHHHC------CCCCEEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 9999999987407------898389931246522388999986427-755328984157788034444445677788886 Q gi|254780684|r 173 GKSTLLSMFARSD------CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 (438) Q Consensus 173 GKt~Ll~~i~~~~------~~dv~V~alIGeR~rev~efi~~~~~~-~l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyf 245 (438) T Consensus 81 GKs~L~~~i~~~~~~~~~~~~~v~V~~~IGer~rev~e~~~~l~~~~~l~~tvvv~ata~~~p~~r~~a~~~a~aiAEyF 160 (276) T cd01135 81 PHNELAAQIARQAGVVGEEENFAVVFAAMGITMEDARFFKDDFEETGALERVVLFLNLANDPTIERIITPRMALTTAEYL 160 (276) T ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH T ss_conf 36789999999877513688735999615553257999999987166512101466348897688878888877899998 Q ss_pred H-HCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHH Q ss_conf 4-267988999709899999987665404778432366324554200444443113678852355433342167642027 Q gi|254780684|r 246 S-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 (438) Q Consensus 246 r-~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~~~pi 324 (438) T Consensus 161 r~~~Gk~VLl~~D~ltr~A~A~REisl~~g~~P~~~gYp~~vf~~l~~l~ERag~~~~~~GSITa~~~v~~~~dD~~~pi 240 (276) T cd01135 161 AYEKGKHVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPI 240 (276) T ss_pred HHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCH T ss_conf 87369977999456889999999999864899987888850998867888722467999801899989944798867766 Q ss_pred HHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCC Q ss_conf 899986126089870427758971311445640002 Q gi|254780684|r 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 (438) Q Consensus 325 ~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~ 360 (438) T Consensus 241 ~~~~~si~DG~i~Lsr~la~~G~~PAId~~~S~SRv 276 (276) T cd01135 241 PDLTGYITEGQIVLDRQLHNRGIYPPINVLPSLSRL 276 (276) T ss_pred HHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCCC T ss_conf 777765604599997999967999970875576679

HHsearch alignment for GI: 254780684 and conserved domain: cd01135