HHsearch alignment for GI: 254780684 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=94.25 E-value=0.038 Score=34.59 Aligned_cols=32 Identities=38% Similarity=0.499 Sum_probs=27.5
Q ss_pred HHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 00223585037526678899999999874078
Q gi|254780684|r 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 (438)
Q Consensus 155 l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~ 186 (438)
T Consensus 20 s~~i~~ge~~~l~G~NGsGKTTl~~~l~G~~~ 51 (144)
T cd03221 20 SLTINPGDRIGLVGRNGAGKSTLLKLIAGELE 51 (144)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 89987999999998999849999999848988