HHsearch alignment for GI: 254780684 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=94.90 E-value=0.022 Score=36.43 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=28.0
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 520022358503752667889999999987407
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~ 185 (438)
T Consensus 18 ~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~ 50 (201)
T cd03231 18 GLSFTLAAGEALQVTGPNGSGKTTLLRILAGLS 50 (201)
T ss_pred CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 307888799599999999999999999996677