HHsearch alignment for GI: 254780684 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=94.99 E-value=0.017 Score=37.26 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=28.3
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 520022358503752667889999999987407
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~ 185 (438)
T Consensus 22 ~isl~i~~G~~v~ivG~sGsGKSTLl~ll~gl~ 54 (220)
T cd03245 22 NVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLY 54 (220)
T ss_pred CEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 459998799999999999985999999996725