HHsearch alignment for GI: 254780684 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.31 E-value=0.033 Score=35.05 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=28.7
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 5200223585037526678899999999874078
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~ 186 (438)
T Consensus 18 ~vs~~i~~Gei~~iiGpnGaGKSTl~~~i~Gl~~ 51 (213)
T cd03259 18 DLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER 51 (213)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 6177988998999999999739999999975999