HHsearch alignment for GI: 254780684 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=95.61  E-value=0.047  Score=33.95  Aligned_cols=22  Identities=32%  Similarity=0.418  Sum_probs=19.4

Q ss_pred             CEEEEECCCCCCHHHHHHHHHH
Q ss_conf             5037526678899999999874
Q gi|254780684|r  162 QRIGVFAGSGIGKSTLLSMFAR  183 (438)
Q Consensus       162 QR~gIfg~~GvGKt~Ll~~i~~  183 (438)
T Consensus         1 r~i~i~G~aG~GKTtll~kl~~   22 (165)
T pfam05729         1 RTVILQGEAGSGKTTLLQKLAL   22 (165)
T ss_pred             CEEEEECCCCCCHHHHHHHHHH
T ss_conf             9899982798989999999999