RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR03305

>gnl|CDD|132348 TIGR03305, alt_F1F0_F1_bet, alternate F1F0 ATPase, F1 subunit beta. A small number of taxonomically diverse prokaryotic species have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 beta subunit of this apparent second ATP synthase. Length = 449
 Score =  149 bits (379), Expect = 1e-36
 Identities = 91/294 (30%), Positives = 147/294 (50%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
            R+ +  G  ID  +     +    +    P    R    + F+TGI+ ID+  PL  G 
Sbjct: 81  SRMFDVFGNTIDRREPPKDVEWR-SVHQAPPTLTRRSSKSEVFETGIKAIDVLVPLERGG 139

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKKS 217
           + G+F G+G+GK+ LL+    +       +S+   +GER RE  E   + + +   L  +
Sbjct: 140 KAGLFGGAGVGKTVLLTEMIHNMVGQHQGVSIFCGIGERCREGEELYRE-MKEAGVLDNT 198

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R     TA+T+AEYF   +  +VLL++D+I RF  +  E++   G++
Sbjct: 199 VMVFGQMNEPPGARFRVGHTALTMAEYFRDDEKQDVLLLIDNIFRFIQAGSEVSGLLGQM 258

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +EL  L ERI  +    G IT++ +V V  D+  DP A    S L   +
Sbjct: 259 PSRLGYQPTLGTELAELEERI--ATTSDGAITSIQAVYVPADDFTDPAAVHTFSHLSASL 316

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R  A EG YP +DPL S S++A      +    L   +   + ++EE +DI
Sbjct: 317 VLSRKRASEGLYPAIDPLQSTSKMATPGIVGERHYDLAREVRQTLAQYEELKDI 370