RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR03497
>gnl|CDD|132536 TIGR03497, FliI_clade2, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 413
Score = 361 bits (928), Expect = e-100
Identities = 173/382 (45%), Positives = 241/382 (63%), Gaps = 8/382 (2%)
Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
L +V+ + V + P+G E I G LV GR I GRV++ LG+P+DG+
Sbjct: 35 LAEVVGFKEENVLLMPLGEVEGIGPGSLVIATGRPLAIKVGKGLLGRVLDGLGRPLDGEG 94
Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
+ G+ + + P + R R+ +TGI+ ID + GQR+G+FAGSG+GKSTL
Sbjct: 95 PI-IGEEPYPLDNPPPNPLKRPRIRDPLETGIKAIDGLLTIGKGQRVGIFAGSGVGKSTL 153
Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
L M AR+ D +I+L+GERGREVR+FIE LG + LK+SVVVVATSD+ ++R A
Sbjct: 154 LGMIARNAKADINVIALIGERGREVRDFIEKDLGEEGLKRSVVVVATSDQPALMRLKAAF 213
Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
TA IAEYF +G +VLL++DS+TRFA + REI GE P RGY SVFS LP+LLER
Sbjct: 214 TATAIAEYFRDQGKDVLLMMDSVTRFAMAQREIGLAVGEPPTTRGYTPSVFSLLPKLLER 273
Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
G S+K G+IT +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LAS
Sbjct: 274 SGNSQK--GSITGFYTVLVDGDDMNEPIADAVRGILDGHIVLSRELAAKNHYPAIDVLAS 331
Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
VSR+ ++ S + K+L L L+ ++E D+ IG Y+ G + +D+A+ + I F
Sbjct: 332 VSRVMNEIVSEEHKELAGKLRELLAVYKEAEDLINIGAYKRGSNPKIDEAIRYIEKINSF 391
Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
LKQ + + F+E + L+
Sbjct: 392 LKQGIDEKFT---FEETVQLLK 410