RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR01042
>gnl|CDD|162171 TIGR01042, V-ATPase_V1_A, V-type (H+)-ATPase V1, A subunit. This models eukaryotic vacuolar (H+)-ATPase that is responsible for acidifying cellular compartments. This enzyme shares extensive sequence similarity with archaeal ATP synthase. Length = 591
Score = 91.7 bits (228), Expect = 3e-19
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 25/233 (10%)
Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK---STLLSMFARSDCFDKVIISL-VGERGREV 202
TG RV+D P G + G GK S LS ++ SD I+ + GERG E+
Sbjct: 212 TGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSD----AIVYVGCGERGNEM 267
Query: 203 REFIEDY---------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNV 252
E + D+ +++ K +VA + P+ + A + T +T+AEYF G NV
Sbjct: 268 AEVLMDFPELTMEVDGREESIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNV 327
Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER------IGPSEKEKGN 306
++ DS +R+A ++REI+ E+P GYP + + L ER +G E+E G+
Sbjct: 328 SMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGSPERE-GS 386
Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
++ V +V G + +DP+ + I+ L++ LA+ +P V+ L S S+
Sbjct: 387 VSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSK 439