RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR03498

>gnl|CDD|163293 TIGR03498, FliI_clade3, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 418
 Score =  574 bits (1482), Expect = e-164
 Identities = 222/414 (53%), Positives = 288/414 (69%), Gaps = 4/414 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++++T +   V  LS+ V LGD   +        L +V+  N D V + P    E + 
Sbjct: 1   GRVTAVTGLLIEVRGLSRAVRLGDRCAIRARDGRPVLAEVVGFNGDRVLLMPFEPLEGVG 60

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  VF   G   + P   W GRVINALG+PIDG   L +G+    + +  PPAM+R RV
Sbjct: 61  LGCAVFAREGPLAVRPHPSWLGRVINALGEPIDGKGPLPQGERRYPLRASPPPAMSRARV 120

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +   TG+RVID F PLC GQR+G+FAGSG+GKSTLLSM AR+   D V+I+LVGERGRE
Sbjct: 121 GEPLDTGVRVIDTFLPLCRGQRLGIFAGSGVGKSTLLSMLARNTDADVVVIALVGERGRE 180

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+ED LG+  LK+SVVVVATSDESP++R+ A  TA  IAEYF  +G +VLL++DS+T
Sbjct: 181 VREFLEDDLGEEGLKRSVVVVATSDESPLMRRQAAYTATAIAEYFRDQGKDVLLLMDSVT 240

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI   +GE PVARGY  SVFSELPRLLER GP  + KG+IT + +VLVDGD+H
Sbjct: 241 RFAMAQREIGLAAGEPPVARGYTPSVFSELPRLLERAGPGAEGKGSITGIFTVLVDGDDH 300

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+P+AD+VR ILDGHIVL+R++AE GRYP ++ LASVSRLA + WS +E+KLV  L  L+
Sbjct: 301 NEPVADAVRGILDGHIVLDRAIAERGRYPAINVLASVSRLAPRVWSPEERKLVRRLRALL 360

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
            R+EET D+  +G YR G D  LD+A+  VP IY+FL Q P +  S +D F ++
Sbjct: 361 ARYEETEDLIRLGAYRKGSDPELDEAIRLVPKIYEFLTQGPDEPTSLQDPFADL 414