>gnl|CDD|30002 cd01136, ATPase_flagellum-secretory_path_III, Flagellum-specific ATPase/type III secretory pathway virulence-related protein. This group of ATPases are responsible for the export of flagellum and virulence-related proteins. The bacterial flagellar motor is similar to the F0F1-ATPase, in that they both are proton driven rotary molecular devices. However, the main function of the bacterial flagellar motor is to rotate the flagellar filament for cell motility. Intracellular pathogens such as Salmonella and Chlamydia also have proteins which are similar to the flagellar-specific ATPase, but function in the secretion of virulence-related proteins via the type III secretory pathway.. Length = 326

Score = 376 bits (968), Expect = e-105 Identities = 164/320 (51%), Positives = 221/320 (69%), Gaps = 4/320 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LGK ++ ++ P + R+ +++ TG+R ID + Sbjct: 10 LLGRVLDAFGEPLDGKGPLGK-EVRYPLLRTPPNPLKRRPIDEVLPTGVRAIDGLLTVGK 68 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKSTLL M AR D +I+L+GERGREVREFIE LG + LK+SVV Sbjct: 69 GQRLGIFAGSGVGKSTLLGMIARGTTADVNVIALIGERGREVREFIEKDLGEEGLKRSVV 128 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSDESP+LR A TA IAEYF +G +VLL++DS+TRFA + REI +GE P Sbjct: 129 VVATSDESPLLRVKAAYTATAIAEYFRDQGKDVLLLMDSLTRFAMAQREIGLAAGEPPTT 188 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF+ LPRLLER G S+K G+ITA +VLV+GD+ N+PIAD+VRSILDGHIVL+ Sbjct: 189 KGYPPSVFALLPRLLERAGNSDK--GSITAFYTVLVEGDDLNEPIADAVRSILDGHIVLS 246 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA G YP +D L S+SRL + + + K+ L L+ ++E D+ IG Y+ G Sbjct: 247 RALAAAGHYPAIDVLKSISRLMNAVVTPEHKEAARKLRELLSAYQEVEDLIRIGAYKKGS 306 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +D+A+ +P I FLKQ Sbjct: 307 DPEVDEAIKLLPKIEAFLKQ 326

RPSBLAST alignment for GI: 254780684 and conserved domain: cd01136