RPSBLAST alignment for GI: 254780684 and conserved domain: COG0056

>gnl|CDD|30405 COG0056, AtpA, F0F1-type ATP synthase, alpha subunit [Energy production and conversion]. Length = 504
 Score =  152 bits (385), Expect = 2e-37
 Identities = 96/332 (28%), Positives = 152/332 (45%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G   +I  GD V   GR    P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEEDSVGAVILGDYSDIKEGDEVKRTGRILEVPVGEELLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     +  +  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 121 I-DATKTRPVEKKAPGVMDRKSVNEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
             ++  +     K I   +G++   V   +        +  ++VV A++ +S  L+ +AP
Sbjct: 180 IDTIINQKGSGVKCIYVAIGQKRSTVANVVRTLEEHGAMDYTIVVAASASDSAPLQYLAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                +AEYF   G +VL++ D +++ A + REI+      P    YP  VF    RLLE
Sbjct: 240 YAGCAMAEYFRDNGKDVLIVYDDLSKHAVAYREISLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 300 RAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGIRPAINV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A     KK+  SL  ++ ++ E
Sbjct: 360 GLSVSRVGSAAQIKAMKKVAGSLRLILAQYRE 391