HHsearch alignment for GI: 254780685 and conserved domain: COG1815
>COG1815 FlgB Flagellar basal body protein [Cell motility and secretion].
Probab=98.78 E-value=8.1e-09 Score=71.45 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 136999999999999987999775431777113346787999974204
Q gi|254780685|r 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 (243)
Q Consensus 2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~ 49 (243)
T Consensus 5 ~~~~~l~~~al~~~~~Rq~via~NIANadTP~yKa~dv~Fe~~L~~~~ 52 (133)
T COG1815 5 DRAFGLLQKALDVRSLRQEVIANNIANADTPGYKAKDVDFESVLKKAL 52 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 899999999988999999999853102799998744475899999987