HHsearch alignment for GI: 254780685 and conserved domain: PRK12620
>PRK12620 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.83 E-value=5.4e-09 Score=72.47 Aligned_cols=47 Identities=26% Similarity=0.392 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 13699999999999998799977543177711334678799997420
Q gi|254780685|r 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 (243)
Q Consensus 2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~ 48 (243)
T Consensus 6 d~~~~~~~~aL~lr~~Rq~viasNIANadTPgYKardv~Fe~~L~~a 52 (132)
T PRK12620 6 TSFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSA 52 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 87862889999999999999986022168999876658789999998