HHsearch alignment for GI: 254780685 and conserved domain: PRK12624
>PRK12624 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.91 E-value=1.9e-09 Score=75.12 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 36999999999999987999775431777113346787999974204
Q gi|254780685|r 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 (243)
Q Consensus 3 ~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~ 49 (243)
T Consensus 9 kT~~lL~kaLd~~~~Rq~vIa~NIAN~dTPgYK~~dv~Fe~~L~~al 55 (143)
T PRK12624 9 KTQDLLERGMNNSIQKRKVISDNIANADVPHFKRSEVIFESMIKRAI 55 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 69999999999999999999860112689997632062999999998