HHsearch alignment for GI: 254780685 and conserved domain: PRK12626
>PRK12626 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.67 E-value=1.2e-08 Score=70.42 Aligned_cols=48 Identities=25% Similarity=0.385 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 136999999999999987999775431777113346787999974204
Q gi|254780685|r 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 (243)
Q Consensus 2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~ 49 (243)
T Consensus 6 d~~~~~~~~AL~lR~~RqevlAsNIANadTPgYKArDldFe~~L~~al 53 (162)
T PRK12626 6 DAEFAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARAL 53 (162)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 877361099999999999999850013789998643587999999998