HHsearch alignment for GI: 254780685 and conserved domain: PRK12627
>PRK12627 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=94.21 E-value=0.13 Score=28.86 Aligned_cols=43 Identities=28% Similarity=0.489 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHHH
Q ss_conf 99999999999998799977543177711334678-79999742
Q gi|254780685|r 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGA 47 (243)
Q Consensus 5 ~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~-~F~~~~~~ 47 (243)
T Consensus 8 f~l~~~~~~~la~Rq~ViA~NIANADTPgYkarDl~~F~~~l~~ 51 (128)
T PRK12627 8 FRMASAMARHAGERQAVIAQNVANADTPGYRARDLADFAETYAS 51 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHH
T ss_conf 99999999999999999997410379999850000419999984