HHsearch alignment for GI: 254780685 and conserved domain: PRK12691

>PRK12691 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00  E-value=0  Score=451.75  Aligned_cols=236  Identities=22%  Similarity=0.398  Sum_probs=204.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC--------------CCCCCCCCCCCCCC
Q ss_conf             1369999999999999879997754317771133467879999742046765--------------55532111100002
Q gi|254780685|r    2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKISFVASGKEYLS   67 (243)
Q Consensus         2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~~~~~--------------~~~~~~~~~~~~~~   67 (243)
T Consensus         1 lr~lyta~SGm~a~~~~ld~iaNNlANvnT~GfK~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gv~~~~~~~~   80 (262)
T PRK12691          1 MRALSIAATGMAAQQLNVEVISNNIANMNTTGFKRARAEFQDLLYQQERRVGAQSSDNGTIVPTGVQLGLGVKTAAVRRI   80 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf             93199999999999972578888888777564474746389999877413587666656435655410352475468875


Q ss_pred             CCCCCCCCCCCEEEEEECCCCEEEECCCCC-EEEEECCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             245554455640213432750244136763-1232112201565684541468853566454421000000000000245
Q gi|254780685|r   68 KEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG  146 (243)
Q Consensus        68 ~~~G~l~~Tg~~lD~Ai~G~GfF~V~~~~g-~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~g~pI~ip~~~~~~~i~~dG  146 (243)
T Consensus        81 ~~qG~l~~Tg~~lDlAI~G~GfF~V~~~~G~~~yTR~G~F~~d~~G~Lvt~~G-~~vl~~----i~ip~~~~~i~I~~dG  155 (262)
T PRK12691         81 HTQGTLSQTGNDLDLAIQGRGYFQIQLPDGETAYTRDGAFNRSADGQIVTADG-YPVQPG----ITIPQDATSITINASG  155 (262)
T ss_pred             CCCCCCEECCCCCEEEECCCCEEEEECCCCCEEEEECCCEEECCCCCEEECCC-CCCCCC----CCCCCCCCCEEECCCC
T ss_conf             15787530688213898489568885589957365445267989964892799-894676----1058998513787897


Q ss_pred             CCCC------CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-C----CCCCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             4223------432112334545576134432025653456665654-3----4566415624222140239999999999
Q gi|254780685|r  147 EISQ------KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-E----DLSGVTVKRGFLEDSNANSMYEMGQMIH  215 (243)
Q Consensus       147 ~i~~------~g~~v~~l~l~~~~~~~~l~~~~~~~~~~~~~~~~~-~----~~~~~~v~qG~LE~SNVn~~~EMv~lI~  215 (243)
T Consensus       156 ~i~~~~~g~~~~~~vg~l~l~~f~n~~~L~~~g~~lf~~~~~~g~~~~~~~~~~~~~~v~qG~LE~SNVd~~~Em~~mI~  235 (262)
T PRK12691        156 QVSVTLDGQTQPQVLGQITLARFTNEAGLEAIGDNLFRETPASGAPQVGVPGEDGFGTIRQGYLEASNVDVVKEITDLIT  235 (262)
T ss_pred             EEEEEECCCCCCEEEEEEEEEECCCHHHCEECCCCCEEECCCCCCCCCCCCCCCCCEEEECCCEECCCCCHHHHHHHHHH
T ss_conf             69998468877417778999831784770215886177336778851156788872268438565344659999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999999999999999853
Q gi|254780685|r  216 LTQKFNSITTLIDENEKSMLEAIRNIA  242 (243)
Q Consensus       216 ~qRafe~~~k~i~~~de~~~~~in~lg  242 (243)
T Consensus       236 ~qRaye~n~k~i~t~De~~~~a~nllR  262 (262)
T PRK12691        236 AQRAYEMNSKVISAADEMLQTTSKNLR  262 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999999999998668