HHsearch alignment for GI: 254780685 and conserved domain: PRK12819
>PRK12819 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00 E-value=0 Score=436.38 Aligned_cols=239 Identities=22% Similarity=0.278 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC--------CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 13699999999999998799977543177711334678799997420467--------6555532111100002245554
Q gi|254780685|r 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------IDQKISFVASGKEYLSKEVGSF 73 (243)
Q Consensus 2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~G~l 73 (243)
T Consensus 1 lrglY~a~sGm~a~q~~ldviaNNlANvnT~GfK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~qG~l 80 (257)
T PRK12819 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAATHVNLVQGNI 80 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEECCCCCC
T ss_conf 92899999999999987889989998777732183523688888665301588766655432341362101540356652
Q ss_pred CCCCCEEEEEEC----CCCEEEECCCCC-EEEEECCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 455640213432----750244136763-123211220156568454146885356645442100000000000024542
Q gi|254780685|r 74 ISTGTELDFALE----GDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 (243)
Q Consensus 74 ~~Tg~~lD~Ai~----G~GfF~V~~~~g-~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~g~pI~ip~~~~~~~i~~dG~i 148 (243)
T Consensus 81 ~~Tg~~lDlAi~~~~~g~g~F~v~~~~g~~~yTR~G~F~~d~~G~Lvt~~G-~~Vl~~~g~~I~ip~~-~~i~I~~dG~i 158 (257)
T PRK12819 81 QMTNSDTDFFLDDGPAGTSSFFVTSKNGETFLTRDGSFTLNSDRYLQTSSG-AFVMGENNERIRIPEG-AKVAVQADGTL 158 (257)
T ss_pred CCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCEEECCCCCEEECCC-CCCCCCCCCCEECCCC-CEEEEECCCEE
T ss_conf 026886320445135678558998389967898666568989987891899-9831799981461899-70898259748
Q ss_pred CC--CCCCCCCCC--CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23--432112334--54557613443202565345666565434566415624222140239999999999999999999
Q gi|254780685|r 149 SQ--KGKVIATMG--LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 (243)
Q Consensus 149 ~~--~g~~v~~l~--l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~qG~LE~SNVn~~~EMv~lI~~qRafe~~~ 224 (243)
T Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~i~qG~LE~SNV~~~~Em~~mI~~qRafe~~~ 238 (257)
T PRK12819 159 YDAVTQNNIARLQTKTVSAEQNDRLVQRENKSFTLAEGNIANLPNGTGIVKNGMLENSNVDMTKEMADLMTNQRMIQASQ 238 (257)
T ss_pred EECCCCCEEEEEEEEEECCCCHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 51458734457777775366335665057862440688766788876438506510003669999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999853
Q gi|254780685|r 225 TLIDENEKSMLEAIRNIA 242 (243)
Q Consensus 225 k~i~~~de~~~~~in~lg 242 (243)
T Consensus 239 K~i~t~Dem~~ka~n~l~ 256 (257)
T PRK12819 239 RVMTSFDKIYEKEANEIL 256 (257)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 998999999999989757