HHsearch alignment for GI: 254780685 and conserved domain: pfam00460

>pfam00460 Flg_bb_rod Flagella basal body rod protein.
Probab=98.69  E-value=7.3e-09  Score=71.73  Aligned_cols=31  Identities=26%  Similarity=0.477  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             9999999999999879997754317771133
Q gi|254780685|r    5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFR   35 (243)
Q Consensus         5 ~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK   35 (243)
T Consensus         1 l~~a~sal~a~~~~l~vianNiAN~nT~G~k   31 (31)
T pfam00460         1 LYTAVSALNAQQIALDVIANNIANANTTGYK   31 (31)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             9138876508999999998610245576789