HHsearch results for GI: 254780685 and protein with PDBid: 3a69_A

>3a69_A Flagellar HOOK protein FLGE; the bacterial flagellar motor, universal joint, bacterial flagellum, motor protein; 7.10A {Salmonella enterica subsp}
Probab=100.00  E-value=0  Score=310.10  Aligned_cols=230  Identities=20%  Similarity=0.316  Sum_probs=183.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             69999999999999879997754317771133467879999742046765555321111000022455544556402134
Q gi|254780685|r    4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA   83 (243)
Q Consensus         4 ~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~Tg~~lD~A   83 (243)
                      +||+|+|||.|+|++|+|++|||||+|||||||.++.|++++..     .....+|........|.||.++.|++++|+|
T Consensus         1 s~~~a~sGl~A~q~al~vts~NIANaNT~GYsRq~v~f~~~~~~-----~~~G~GV~v~~v~r~~~qg~~~~t~~~~d~a   75 (402)
T 3a69_A            1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----SKVGLGVKVAGITQDFTDGTTTNTGRGLDVA   75 (402)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHC---------------------------------------------------CEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHCC-----CCCCCCEEEEEEEEECCCCCEEECCCCCHHE
T ss_conf             97899999999997357888889877764206570207776466-----8776744776789841456457647600301


Q ss_pred             ECCCCEEEECCCCC-EEEEECCCCEECCCCCEECCCCCCCCCCCC-------------CCCCCC----------------
Q ss_conf             32750244136763-123211220156568454146885356645-------------442100----------------
Q gi|254780685|r   84 LEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA-------------SVPIQI----------------  133 (243)
Q Consensus        84 i~G~GfF~V~~~~g-~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~-------------g~pI~i----------------  133 (243)
                      |.|+|||.+..++| .+|||.|+|.+|.+|+||+..|. .|++..             -.+|.+                
T Consensus        76 i~~~g~f~~~~~~g~~~~tr~g~~~~~~~g~lvn~~g~-~l~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~~~~~~  154 (402)
T 3a69_A           76 ISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGM-QLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQ  154 (402)
T ss_dssp             CSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCC-EEEEEECBTTTTBCCTTCCCEECCCCCCCCCCBCCCEEEEE
T ss_pred             ECCCCEEEEECCCCCEEEEECCCCCCCCCCCEECCCCC-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             42786178862798643641565342788878637896-44123145777522256765552144445676553036763


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q gi|254780685|r  134 --------------------------------------------------------------------------------  133 (243)
Q Consensus       134 --------------------------------------------------------------------------------  133 (243)
                                                                                                      
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (402)
T 3a69_A          155 INLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNEN  234 (402)
T ss_dssp             EEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCCCCCSCSEEEEECTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCC
T ss_conf             02465555665344455776551333337998589972666678776378852379703666555466555226874146


Q ss_pred             --------------------------------------------------CCCCCCCCCCCCCCCCC-----CCCCCCCC
Q ss_conf             --------------------------------------------------00000000002454223-----43211233
Q gi|254780685|r  134 --------------------------------------------------PQKDEIFNVGEKGEISQ-----KGKVIATM  158 (243)
Q Consensus       134 --------------------------------------------------p~~~~~~~i~~dG~i~~-----~g~~v~~l  158 (243)
                                                                        +.....+.|++||.|..     ....++++
T Consensus       235 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~dG~~~~~~~~~~i~~dG~v~~~~~~~~~~~~~~~  314 (402)
T 3a69_A          235 GILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQI  314 (402)
T ss_dssp             SBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEESCBCCCCEEEEEECTTCEEEEEETTSCEEEEEEE
T ss_pred             CCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             52145772000234545655543100001120013565311210246655542123421789559997356542100112


Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCCCCCCC-----CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4545576134432025653456665654-----34566415624222140239999999999999999999999999999
Q gi|254780685|r  159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS  233 (243)
Q Consensus       159 ~l~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~v~qG~LE~SNVn~~~EMv~lI~~qRafe~~~k~i~~~de~  233 (243)
                      .++.|.++.+|...+++.|.........     .......|.||+||.||||+.+||++||..||+||+++|+|++.|||
T Consensus       315 ~~~~~~n~~~l~~~g~~~~~~~~~sg~~~~~~~~~~~~~~~~~~~lE~S~V~ldeEmtnli~~Q~aY~A~akvitt~dem  394 (402)
T 3a69_A          315 VLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI  394 (402)
T ss_dssp             CEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             34566785773304796064355677730067887873148107545114799999999999999999975266499999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780685|r  234 MLEAIR  239 (243)
Q Consensus       234 ~~~~in  239 (243)
                      |.++||
T Consensus       395 ld~lin  400 (402)
T 3a69_A          395 LNTLVN  400 (402)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999970