BLAST/PSIBLAST alignment of GI: 254780685 and GI: 86356306 at iteration 1
>gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42] Length = 244
>gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 244
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%)
Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+
Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60
Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
G +YL+++ G TG LDFA++GDAWFAL++P G +LTRDGRF + + G LVS G
Sbjct: 61 QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIRETGELVSIRG- 119
Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
YPVLD PIQ+ K VG G I Q + + ++GL+ D+S+G++R ENSGI
Sbjct: 120 YPVLDAGGAPIQLDTKAGEPAVGSDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179
Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S +A++
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKQAVQT 239
Query: 241 IA 242
+
Sbjct: 240 LG 241