BLAST/PSIBLAST alignment of GI: 254780685 and GI: 86356306 at iteration 1
>gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42] Length = 244
>gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 244
 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWFAL++P G +LTRDGRF + + G LVS  G 
Sbjct: 61  QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIRETGELVSIRG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           YPVLD    PIQ+  K     VG  G I Q  + + ++GL+  D+S+G++R ENSGI   
Sbjct: 120 YPVLDAGGAPIQLDTKAGEPAVGSDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  +A++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKQAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241