RPSBLAST alignment for GI: 254780685 and conserved domain: TIGR03506

>gnl|CDD|163298 TIGR03506, FlgEFG_subfam, fagellar hook-basal body proteins. This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR00488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain. Length = 231
 Score =  140 bits (355), Expect = 4e-34
 Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 12/222 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    L+   A    L  +A+N++N +T GF+  + +F +++    +   Q    V +  
Sbjct: 2   ALYTALSGLNAQSSALDVIANNIANVNTTGFKRSRAEFQDLLSQSGSGSGQVGGGVRASG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  G+   TG  LD A+ GD +F ++ P G   TR G F++  DG LV+  G Y +
Sbjct: 62  VAQDFSQGNLQPTGNSLDLAISGDGFFVVQGPDGTAYTRAGNFQLDADGYLVNPDG-YYL 120

Query: 124 LDMASV-PIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGI 177
           L      P+ +P      ++G  G +S          +  + L +     G  +   +  
Sbjct: 121 LAWTGSGPVTVPPDGASVSIGSDGTVSATYSNGQTVTLGQIALANFPNPDGLRKEGGNLY 180

Query: 178 SPNIPP-TPLEDLSG----VTVKRGFLEDSNANSMYEMGQMI 214
           S        L   +G     +++ G LE SN +   E+  MI
Sbjct: 181 SATRDSGAALVGAAGTGGFGSIQSGALESSNVDLAAELVNMI 222