RPSBLAST alignment for GI: 254780685 and conserved domain: COG4787

>gnl|CDD|34398 COG4787, FlgF, Flagellar basal body rod protein [Cell motility and secretion]. Length = 251
 Score = 72.3 bits (177), Expect = 1e-13
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           +G A+QL  +Q ++  A+N++N  T GFR        V   +  D     +FV +     
Sbjct: 9   MGAASQLLEQQAVT--ANNLANASTTGFRAQLNAARAV--QVHGDSLPTRTFVMASTPGT 64

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS   TG  LD A++GD W A++   G    TR+G  ++   G L +  G +PV+ 
Sbjct: 65  DMSPGSLDYTGRPLDVAIQGDGWLAVQDADGSEAYTRNGNIQIDATGQL-TIQG-HPVIG 122

Query: 126 MASVPIQIPQKDEIFNVGEKGEIS-----QKGKVIATMG-LYSVDMSQGFVRRENSGI-- 177
               PI +P       +   G IS          +A +G L  V  +   V+R + G+  
Sbjct: 123 EGG-PITVP-PGAKVTIAADGTISALNPGDPANTVAVVGRLKLVQATGQEVQRGDDGLFR 180

Query: 178 -SPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN---SITTLIDE 229
            +             D S V V  G LE SN N++ EM  MI L ++F     + +  D+
Sbjct: 181 LTAETQQPRGQVLKADPS-VRVMSGALEGSNVNAVEEMTDMISLARQFEMQMKMISTADD 239

Query: 230 NEKSMLEAIR 239
           N  +  + +R
Sbjct: 240 NAGAANQLLR 249