HHsearch alignment for GI: 254780687 and conserved domain: COG1776
>COG1776 CheC Chemotaxis protein CheC, inhibitor of MCP methylation [Cell motility and secretion / Signal transduction mechanisms].
Probab=98.65 E-value=4.5e-06 Score=59.07 Aligned_cols=129 Identities=7% Similarity=0.087 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCC--EEEEEEECCCCCCEEEEEECHHHHHHHH
Q ss_conf 99999999999999999999986298079986472566799897116886--3999997367783399998878999999
Q gi|254780687|r 31 IEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKEN--FVFSQASLSSWSSNFFIGCSNNLVITLL 108 (318)
Q Consensus 31 ~~~~~~~~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p--~~~~i~~~~pl~g~~ll~id~~l~~~li 108 (318)
T Consensus 11 ~~d~l~E~~NI~~g~aataLs~L~g~~v~isvp~v~iv~~e~l~~~~~~~~~v~~~v~~~eg~~G~~l~l~~~~~a~~i~ 90 (203)
T COG1776 11 EKDALKEIGNIGAGSAATALSQLLGKKVEISVPKVKIVSIEELPKLLGDPEGVVVTVQLIEGFSGSILLLFPEESAAAIA 90 (203)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECHHHHHHHH
T ss_conf 99999999987777799999998499706616942884088888871886508999975137873489982766899999
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
Q ss_conf 88727888766666656579899999999999999999998510027320000024
Q gi|254780687|r 109 ENLLGASHETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFY 164 (318)
Q Consensus 109 d~~lGG~g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~ 164 (318)
T Consensus 91 ~lm~G~~~~~~~-----~ldem~~Sav~E~~Nil~gs~~t~la~~~~~~i~~spP~ 141 (203)
T COG1776 91 DLMMGGEGASKE-----ELDEMELSALMEVGNILAGAFLTALANQLGLPIDISPPE 141 (203)
T ss_pred HHHCCCCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 995599877754-----446546999999999999999999999859704479980