HHsearch alignment for GI: 254780687 and conserved domain: PRK06788
>PRK06788 flagellar motor switch protein; Validated.
Probab=99.59 E-value=1e-14 Score=115.77 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=71.8
Q ss_pred HHHHHHCEEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCEEEEEECCEEEEEEEEEEECCEEEEEEEECCCCH
Q ss_conf 9997408007999981234309899457999789825789973899999999999999878897899998425814
Q gi|254780687|r 232 ARKTYQLNVNIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINFD 307 (318)
Q Consensus 232 ~~~l~~~~v~i~a~Lg~~~l~l~dil~L~vGDVI~L~~~~~~~v~v~v~g~~~f~g~~G~~~~~~AVrI~~~i~~~ 307 (318)
T Consensus 28 ldll~DV~v~vsVELGrt~m~ikdlL~L~~GsVVELdk~AGepvDi~VNgkliArGEVVVvde~fGVRITeI~~~k 103 (119)
T PRK06788 28 IDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADK 103 (119)
T ss_pred CCEEEECEEEEEEEECCEEEEHHHHHCCCCCCEEEECCCCCCCEEEEECCEEEEEEEEEEECCCCEEEEEEECCHH
T ss_conf 5569712069999975425689997457998689984348996799999999987759998586068999844456