HHsearch alignment of GI: 254780687 and MMDB domain: 3hm4_A_
>3hm4_A (A:) Chemotaxis protein CHEX; YP_386777.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.30A {Desulfovibrio desulfuricans subsp} PDB: 3h4y_A*
Probab=97.49 E-value=0.0031 Score=40.02 Aligned_cols=145 Identities=8% Similarity=0.047 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEE-CCCCCCEEEEEECHHHHHHHHHHHHCCC
Q ss_conf 999999999999999862980799864725667998971168863999997-3677833999988789999998872788
Q gi|254780687|r 37 SLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQAS-LSSWSSNFFIGCSNNLVITLLENLLGAS 115 (318)
Q Consensus 37 ~~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~-~~pl~g~~ll~id~~l~~~lid~~lGG~ 115 (318)
.+...+.......|++.++..++++...++.. ....+.+.+... ..++.|..++.++...+..+++.++|.+
T Consensus 8 ei~n~~~~~a~~~l~~~~~~~v~~~~~~~~~~-------~~~~~~v~v~i~~~G~~~G~~~l~~~~~~a~~la~~~~g~~ 80 (156)
T 3hm4_A 8 EIAKPFVTATTNVLSTXAGIQPIPGQPYVKKN-------NVAKGDVSAVVGITGHKNGSISVTFTKQCAIAVVKAXLGDD 80 (156)
T ss_dssp GGHHHHHHHHHHHHHHHHCCCCEECCCEECCS-------SCEEEEEEEEEEEESSSCEEEEEEECHHHHHHHHHHHHCSS
T ss_pred EEHHHHHHHHHHHHHHHHCCCCCCCCCEECCC-------CCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHHHHHCCCC
T ss_conf 56488999999999998688743177665156-------67788789999960166379999988999999999971999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCHHHHCCCCCCCEEEEEEEEEEECCEEE
Q ss_conf 87666666565798999999999999999999985100273200000244311000012478718999998866678137
Q gi|254780687|r 116 HETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIENVAS 195 (318)
Q Consensus 116 g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~vi~i~~~v~~~~~~g 195 (318)
. .++++..+..+..+.+.+.......++... .+..+..|.........-...+....+.+.|.++.+....
T Consensus 81 ~--------~~~de~~~dal~Ei~Nii~G~~~~~l~~~~-~~~~~s~P~v~~g~~~~i~~~~~~~~~~i~f~~~~~~~~~ 151 (156)
T 3hm4_A 81 I--------QDIIQDTKDAVGEVTNXISGQARAALSEXG-XTFQGATPSVIXGDGHTISHVTKSPVIAIPFKTNHGEFTV 151 (156)
T ss_dssp C--------SCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEECCCEEEEEEEEEEEECCSSCCEEEEEECTTCCEEE
T ss_pred C--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEECCCEEEECCCCEEEECCCCCEEEEEEEECCCEEEE
T ss_conf 7--------652488999999999998999999998679-8275269938947983454168997899999966987999
Q ss_pred EE
Q ss_conf 99
Q gi|254780687|r 196 SF 197 (318)
Q Consensus 196 ~~ 197 (318)
.+
T Consensus 152 ~i 153 (156)
T 3hm4_A 152 EF 153 (156)
T ss_dssp EE
T ss_pred EE
T ss_conf 99