HHsearch results for GI: 254780687 and protein with PDBid: 2hp7_A
>2hp7_A Flagellar motor switch protein FLIM; bacterial chemotaxis, flagellar switch complex, signaling protein; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=1e-35 Score=251.93 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEECCCCCCEEEEEECHHHHHHH
Q ss_conf 66799999999999999999999986298079986472566799897116886399999736778339999887899999
Q gi|254780687|r 28 KKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQASLSSWSSNFFIGCSNNLVITL 107 (318)
Q Consensus 28 ~~~~~~~~~~~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~~~pl~g~~ll~id~~l~~~l 107 (318)
++...++++.++|+|+|.++..|++++|..++|++ ++++.+|+||++++|.|+++++++++||+|++++.+|++++|++
T Consensus 5 ske~l~~L~~I~e~far~~~~~l~~~lr~~~~v~~-~v~~~~~~ef~~~l~~p~~l~i~~~~pl~g~~ll~i~~~l~~~~ 83 (183)
T 2hp7_A 5 SKEQLRTFQMIHENFGRALSTYLSGRLRTFVDVEI-SIDQLTYEEFIRSVMIPSFIVIFTGDVFEGSAIFEMRLDLFYTM 83 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEE-EEEEEEHHHHHHHSCSSCEEEEEEETTCSSCEEEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE-EEEEEEHHHHHHHCCCCEEEEEEEECCCCCCEEEEECHHHHHHH
T ss_conf 35466799999999999999999998688847999-46899899999658887289998604658807999886999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCHHHHCCCCCCCEEEEEEEE
Q ss_conf 98872788876666665657989999999999999999999851002732000002443110000124787189999988
Q gi|254780687|r 108 LENLLGASHETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMN 187 (318)
Q Consensus 108 id~~lGG~g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~vi~i~~~ 187 (318)
||++|||.|... ++|+||+||.++++++++.++++|.++|+++.++++.+...++ |+++++++.|+|.+++++|+
T Consensus 84 vD~l~GG~g~~~---~~R~lT~iE~~i~~~i~~~~~~~l~~aw~~~~~~~~~~~~~e~--np~~~~i~~~~e~vv~~~f~ 158 (183)
T 2hp7_A 84 LDIIMGGPGENP---PNRPPTEIETSIMRKEVTNMLTLLAQAWSDFQYFIPSIENVET--NPQFVQIVPPNEIVLLVTAS 158 (183)
T ss_dssp HHHHHTCC-------CCSCCCHHHHHHHHHHHHHHHHHHHHHTHHHHCCCEEEEEEES--CGGGCCSSCTTSEEEEEEEE
T ss_pred HHHHCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC--CHHHHCCCCCCCEEEEEEEE
T ss_conf 999748999988---9987868889999999999999999998533137740334233--86765638999859999999
Q ss_pred EEECCEEEEEEEEEEHHHHHHHHHH
Q ss_conf 6667813799998504775256775
Q gi|254780687|r 188 MTIENVASSFVLIIPQETLLKTTLI 212 (318)
Q Consensus 188 v~~~~~~g~~~l~lP~~~l~~~~~~ 212 (318)
+++|+.+|.+++|+||++++|++++
T Consensus 159 v~~g~~~g~~~i~iP~~~Lepi~~k 183 (183)
T 2hp7_A 159 VSWGEFTSFINVCWPFSLLEPLLEK 183 (183)
T ss_dssp EEETTEEEEEEEEEEHHHHHHHHHC
T ss_pred EEECCCCEEEEEEEHHHHHHHHCCC
T ss_conf 9989964299999638841433069