HHsearch results for GI: 254780687 and protein with PDBid: 3hm4_A
>3hm4_A Chemotaxis protein CHEX; YP_386777.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.30A {Desulfovibrio desulfuricans subsp} PDB: 3h4y_A*
Probab=97.15 E-value=0.009 Score=36.03 Aligned_cols=145 Identities=8% Similarity=0.022 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEE-CCCCCCEEEEEECHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999862980799864725667998971168863999997-367783399998878999999887278887
Q gi|254780687|r 39 GYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQAS-LSSWSSNFFIGCSNNLVITLLENLLGASHE 117 (318)
Q Consensus 39 ~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~-~~pl~g~~ll~id~~l~~~lid~~lGG~g~ 117 (318)
..-|.......|++.++..+......++.. ..+.+.+.+++. ..+++|..++.++..++..++..|+|.+.
T Consensus 10 ~npFi~at~~vl~~m~~~~v~~~~p~~~~~-------~~~~~~v~~~I~~~G~~~G~v~l~~~~~~a~~ia~~m~g~~~- 81 (156)
T 3hm4_A 10 AKPFVTATTNVLSTMAGIQPIPGQPYVKKN-------NVAKGDVSAVVGITGHKNGSISVTFTKQCAIAVVKAMLGDDI- 81 (156)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEECCCEECCS-------SCEEEEEEEEEEEESSSCEEEEEEECHHHHHHHHHHHHCSSC-
T ss_pred EHHHHHHHHHHHHHHHCCCCEECCCEEECC-------CCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHHHHHCCCCC-
T ss_conf 289899999999998499746388676256-------677888999999701552899999789999999999739996-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCHHHHCCCCCCCEEEEEEEEEEECCEEEEE
Q ss_conf 66666656579899999999999999999998510027320000024431100001247871899999886667813799
Q gi|254780687|r 118 TIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIENVASSF 197 (318)
Q Consensus 118 ~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~vi~i~~~v~~~~~~g~~ 197 (318)
.++++.-+..+..+.+.+.......++.. +....+..|.........-....+...+.+.|....|.. .+
T Consensus 82 -------~~~~e~~~da~~E~~N~i~G~~~~~l~~~-g~~~~ls~P~v~~g~~~~i~~~~~~~~~~i~f~~~~G~~--~i 151 (156)
T 3hm4_A 82 -------QDIIQDTKDAVGEVTNMISGQARAALSEM-GMTFQGATPSVIMGDGHTISHVTKSPVIAIPFKTNHGEF--TV 151 (156)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEECCCEEEEEEEEEEEECCSSCCEEEEEECTTCCE--EE
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCEEEECCCCEEEECCCCCEEEEEEEECCCEE--EE
T ss_conf -------40558999999999999899999999877-983750699289679824540689868999999569759--99
Q ss_pred EEEE
Q ss_conf 9985
Q gi|254780687|r 198 VLII 201 (318)
Q Consensus 198 ~l~l 201 (318)
++|+
T Consensus 152 ~i~l 155 (156)
T 3hm4_A 152 EFCL 155 (156)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9996