HHSEARCH alignment of GI: 254780687 and SCOP domain: d1xkoa_

Alignment
>d1xkoa_ d.252.1.1 (A:) Chemotaxis protein CheX {Thermotoga maritima [TaxId: 2336]}
Probab=96.41  E-value=0.028  Score=31.19  Aligned_cols=113  Identities=5%  Similarity=0.023  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEEC-CCCCCEEEEEECHHHHHHHHHHHHCCC
Q ss_conf             9999999999999998629807998647256679989711688639999973-677833999988789999998872788
Q gi|254780687|r   37 SLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQASL-SSWSSNFFIGCSNNLVITLLENLLGAS  115 (318)
Q Consensus        37 ~~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~~-~pl~g~~ll~id~~l~~~lid~~lGG~  115 (318)
                      .+-.-|.......|++.++..+......++..       ..+.+.+.+++.. .++.|..++.++..++..+++.|+||.
T Consensus         5 e~in~f~~a~~~vl~~m~~~e~~~~~~~~~~~-------~~~~~~i~~~i~~~G~~~G~~~l~~~~~~a~~i~~~mlg~~   77 (153)
T d1xkoa_           5 RIVNALIGSVYETIRDVLGIEPKTGKPSTVSH-------IEIPHSLVTVIGITGGIEGSLIYSFSSETALKVVSAMMGGM   77 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSCCEECCCEEESS-------CCCCCSEEEEEEEEESSCEEEEEEECHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC-------CCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHCCC
T ss_conf             99999999999999998599842388546622-------56788789999961464279999988999999999983899


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
Q ss_conf             8766666656579899999999999999999998510027320000024
Q gi|254780687|r  116 HETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFY  164 (318)
Q Consensus       116 g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~  164 (318)
                      ..       .++.+.....+..+.+.+++.....++.. +....+..|.
T Consensus        78 ~~-------~~~~e~~~da~~E~~NiI~G~~~~~l~~~-g~~i~~s~P~  118 (153)
T d1xkoa_          78 EY-------NQLDELALSAIGELGNMTAGKLAMKLEHL-GKHVDITPPT  118 (153)
T ss_dssp             CC-------CSCCHHHHHHHHHHHHHHHHHHHHHCCC----CEEECCCE
T ss_pred             CC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCE
T ss_conf             87-------40778899999999999999999999867-9869844997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: CheC-like
superfamily: CheC-like
family: CheC-like
domain: Chemotaxis protein CheX
species: Thermotoga maritima [TaxId: 2336]