BLAST/PSIBLAST alignment of GI: 254780687 and GI: 222147563 at iteration 1
>gi|222147563|ref|YP_002548520.1| flagellar motor switch protein [Agrobacterium vitis S4] Length = 319
>gi|221734551|gb|ACM35514.1| flagellar motor switch protein [Agrobacterium vitis S4] Length = 319
 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 169/304 (55%)

Query: 12  PLHPILLARLTGKLGDKKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFS 71
           P+   LLARLTG LGD K++EK+    G LY +FLP +F  + +L +++ Y   +SG   
Sbjct: 15  PMDHALLARLTGGLGDMKSVEKLCQDFGQLYSEFLPDVFHSETNLTIEVGYLGFKSGLMR 74

Query: 72  HIIHSFKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHETIPQLYNRSLSTVE 131
            +I S  +NFV +  SL +WS NF + C N  VITL+E LLG   E I +   R LS +E
Sbjct: 75  DLIASLGDNFVLANTSLRNWSQNFVMACGNGFVITLMETLLGGMQEFIGEPIKRPLSNIE 134

Query: 132 KKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIE 191
             LA     +I+ VL   ++ T    P  E  ++ +   +       EF   ++M++ + 
Sbjct: 135 LDLAVMVFERIANVLRSGVNATGGFEPIFERPHNWENRLRQDGEQIEEFGALVHMSIKLG 194

Query: 192 NVASSFVLIIPQETLLKTTLISLSSQNKSENQSEDLIDPFARKTYQLNVNIDTRINLKKT 251
            + S F LIIPQ+TLLKT + +  S+N+     ++  +  A +  +  V ++ RI+L+  
Sbjct: 195 KITSDFALIIPQKTLLKTNVTAPKSKNQVSKARKEWAEQLAEQVRKSQVTLEGRISLQSL 254

Query: 252 TLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINFDQKSL 311
           +L  V  L  G VIPFL +      +SANG+++Y+CE GR G +YT+R+    + D + L
Sbjct: 255 SLLTVSKLAAGDVIPFLEKGDVTVDVSANGRDLYTCEFGRAGDHYTVRVKSMHSTDSELL 314

Query: 312 KNFL 315
           ++ +
Sbjct: 315 RHLM 318