BLAST/PSIBLAST alignment of GI: 254780687 and GI: 222147563 at iteration 1
>gi|222147563|ref|YP_002548520.1| flagellar motor switch protein [Agrobacterium vitis S4] Length = 319
>gi|221734551|gb|ACM35514.1| flagellar motor switch protein [Agrobacterium vitis S4] Length = 319
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 169/304 (55%)
Query: 12 PLHPILLARLTGKLGDKKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFS 71
P+ LLARLTG LGD K++EK+ G LY +FLP +F + +L +++ Y +SG
Sbjct: 15 PMDHALLARLTGGLGDMKSVEKLCQDFGQLYSEFLPDVFHSETNLTIEVGYLGFKSGLMR 74
Query: 72 HIIHSFKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHETIPQLYNRSLSTVE 131
+I S +NFV + SL +WS NF + C N VITL+E LLG E I + R LS +E
Sbjct: 75 DLIASLGDNFVLANTSLRNWSQNFVMACGNGFVITLMETLLGGMQEFIGEPIKRPLSNIE 134
Query: 132 KKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIE 191
LA +I+ VL ++ T P E ++ + + EF ++M++ +
Sbjct: 135 LDLAVMVFERIANVLRSGVNATGGFEPIFERPHNWENRLRQDGEQIEEFGALVHMSIKLG 194
Query: 192 NVASSFVLIIPQETLLKTTLISLSSQNKSENQSEDLIDPFARKTYQLNVNIDTRINLKKT 251
+ S F LIIPQ+TLLKT + + S+N+ ++ + A + + V ++ RI+L+
Sbjct: 195 KITSDFALIIPQKTLLKTNVTAPKSKNQVSKARKEWAEQLAEQVRKSQVTLEGRISLQSL 254
Query: 252 TLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINFDQKSL 311
+L V L G VIPFL + +SANG+++Y+CE GR G +YT+R+ + D + L
Sbjct: 255 SLLTVSKLAAGDVIPFLEKGDVTVDVSANGRDLYTCEFGRAGDHYTVRVKSMHSTDSELL 314
Query: 312 KNFL 315
++ +
Sbjct: 315 RHLM 318