BLAST/PSIBLAST alignment of GI: 254780687 and GI: 325291948 at iteration 1
>gi|325291948|ref|YP_004277812.1| Flagellar motor switch protein [Agrobacterium sp. H13-3] Length = 319
>gi|45479283|gb|AAS66685.1| FliM [Agrobacterium sp. H13-3] Length = 319
>gi|325059801|gb|ADY63492.1| Flagellar motor switch protein [Agrobacterium sp. H13-3] Length = 319
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 165/301 (54%), Gaps = 2/301 (0%)
Query: 17 LLARLTGKLGDKKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHS 76
LLA+LTG L D+KTI K+ S +G+LY +FLP IF + + +D+ Y +SG + +I +
Sbjct: 18 LLAKLTGGLSDRKTIAKVGSDIGHLYSEFLPDIFHSETGIAIDVEYIGSESGLMTDLIAN 77
Query: 77 FKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHETIPQLYNRSLSTVEKKLAK 136
NF + SL +W NF + N VI L+E +LGA+ +TI + RSLS +E LA
Sbjct: 78 IGGNFSVADCSLRNWCPNFMMAVGNGFVIALMERMLGAAADTIGEPDERSLSHIELDLAA 137
Query: 137 RTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIENVASS 196
+ +I VL ++ ++ + + ++ + T+ M + I V+S
Sbjct: 138 MVLGRIGGVLRSGVNAPGGFEATIDLPFTANGKSAFEEMIAGLYGVTVRMKIAIGKVSSE 197
Query: 197 FVLIIPQETLLKTTLISLSSQNKSENQSEDLIDPFARKTYQLNVNIDTRINLKKTTLKDV 256
F LI+PQ LLKT++ + + ++ + + +D + + + V ++ RI L+ TL+ +
Sbjct: 198 FALIVPQRPLLKTSIAAPKASAQALKKQAEWVDLISEQVKRSQVTLEARIKLETLTLRTI 257
Query: 257 VTLKIGQVIPF--LHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINFDQKSLKNF 314
L G VIPF L ++ +SANG ++Y+CE G+ G Y +R+ + ++ D + L++
Sbjct: 258 SRLVAGDVIPFQDLKQDDIGVEVSANGSKLYNCEFGKSGDRYMVRVKNNVSTDDEILRHL 317
Query: 315 L 315
+
Sbjct: 318 M 318