BLAST/PSIBLAST alignment of GI: 254780687 and GI: 325291948 at iteration 1
>gi|325291948|ref|YP_004277812.1| Flagellar motor switch protein [Agrobacterium sp. H13-3] Length = 319
>gi|45479283|gb|AAS66685.1| FliM [Agrobacterium sp. H13-3] Length = 319
>gi|325059801|gb|ADY63492.1| Flagellar motor switch protein [Agrobacterium sp. H13-3] Length = 319
 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 165/301 (54%), Gaps = 2/301 (0%)

Query: 17  LLARLTGKLGDKKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHS 76
           LLA+LTG L D+KTI K+ S +G+LY +FLP IF  +  + +D+ Y   +SG  + +I +
Sbjct: 18  LLAKLTGGLSDRKTIAKVGSDIGHLYSEFLPDIFHSETGIAIDVEYIGSESGLMTDLIAN 77

Query: 77  FKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHETIPQLYNRSLSTVEKKLAK 136
              NF  +  SL +W  NF +   N  VI L+E +LGA+ +TI +   RSLS +E  LA 
Sbjct: 78  IGGNFSVADCSLRNWCPNFMMAVGNGFVIALMERMLGAAADTIGEPDERSLSHIELDLAA 137

Query: 137 RTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIENVASS 196
             + +I  VL   ++        ++  +  +        ++  +  T+ M + I  V+S 
Sbjct: 138 MVLGRIGGVLRSGVNAPGGFEATIDLPFTANGKSAFEEMIAGLYGVTVRMKIAIGKVSSE 197

Query: 197 FVLIIPQETLLKTTLISLSSQNKSENQSEDLIDPFARKTYQLNVNIDTRINLKKTTLKDV 256
           F LI+PQ  LLKT++ +  +  ++  +  + +D  + +  +  V ++ RI L+  TL+ +
Sbjct: 198 FALIVPQRPLLKTSIAAPKASAQALKKQAEWVDLISEQVKRSQVTLEARIKLETLTLRTI 257

Query: 257 VTLKIGQVIPF--LHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINFDQKSLKNF 314
             L  G VIPF  L ++     +SANG ++Y+CE G+ G  Y +R+ + ++ D + L++ 
Sbjct: 258 SRLVAGDVIPFQDLKQDDIGVEVSANGSKLYNCEFGKSGDRYMVRVKNNVSTDDEILRHL 317

Query: 315 L 315
           +
Sbjct: 318 M 318