RPSBLAST alignment of GI: 254780687 and SCOP domain: d1o6aa_

Alignment

>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]} Length = 87

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 238 LNVNIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYT 297
           + + +   +   + TLK V+ +  G +I           +  NGK I   E+  + +N+ 
Sbjct: 10  IPLKVTVELGRTRMTLKRVLEMIHGSIIELDKLTGEPVDILVNGKLIARGEVVVIDENFG 69

Query: 298 IRITDRINFDQ--KSLK 312
           +RIT+ ++  +  + L 
Sbjct: 70  VRITEIVSPKERLELLN 86

SCOP domain information

class: All beta proteins
fold: Surface presentation of antigens (SPOA)
superfamily: Surface presentation of antigens (SPOA)
family: Surface presentation of antigens (SPOA)
domain: Putative flagelar motor switch protein FliN
species: Thermotoga maritima [TaxId: 2336]