HHsearch alignment for GI: 254780688 and conserved domain: PRK08158
>PRK08158 surface presentation of antigens protein SpaO; Validated.
Probab=99.65 E-value=5.9e-16 Score=110.90 Aligned_cols=75 Identities=23% Similarity=0.433 Sum_probs=70.5
Q ss_pred HHHHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf 234305513899999213442999945797889984777888069999998999999999568887055899973167
Q gi|254780688|r 69 FDLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEILNA 146 (147)
Q Consensus 69 ~~~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~iis~ 146 (147)
T Consensus 224 l~d~~~LpV~l~FvL~~~~~tl~eL~~l~pG~vl~L~~~~e~~V~I~aNg~l~g~GELV~i~d---~LgVEI~~w~~~ 298 (303)
T PRK08158 224 LPGLNQLPVKLEFVLYRKNVTLAELEELCQQQLLSLPTNAELNVEIRANGALLGNGELVQMDD---TLGVEIHEWLSG 298 (303)
T ss_pred CCCHHHCCEEEEEEECCCEECHHHHHHCCCCCEECCCCCCCCEEEEEECCEEEEEEEEEEECC---EEEEEEHHHHCC
T ss_conf 787532925899997374885999963089847617999764089999998986665999888---366877665546