HHsearch alignment for GI: 254780688 and conserved domain: PRK08158
>PRK08158 surface presentation of antigens protein SpaO; Validated.
Probab=95.91 E-value=0.024 Score=33.31 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=44.1
Q ss_pred HCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEE
Q ss_conf 30551389999921344299994579788998477788806999999899999
Q gi|254780688|r 72 IMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKG 124 (147)
Q Consensus 72 l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~G 124 (147)
T Consensus 145 ~~~lp~~l~fvLG~S~ls~~lL~~I~~GDvLlI~~~~---~~v~i~gr~ig~f 194 (303)
T PRK08158 145 PKMLRWPLRFVIGSSDTQRSLLGRIGIGDVLLISTSR---AEVYCYAKKIGHF 194 (303)
T ss_pred CCCCCEEEEEEEEECCCCHHHHHCCCCCCEEEEEECC---CEEEECCEEEEEE
T ss_conf 5656268999975340789887205667589995055---1379957998888