HHSEARCH alignment of GI: 254780688 and SCOP domain: d1o9ya_

Alignment

Probab=99.77  E-value=1.3e-18  Score=123.38  Aligned_cols=71  Identities=14%  Similarity=0.347  Sum_probs=68.3

Q ss_pred             HHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEE
Q ss_conf             43055138999992134429999457978899847778880699999989999999995688870558999731
Q gi|254780688|r   71 LIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEIL  144 (147)
Q Consensus        71 ~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~ii  144 (147)
                      .+.++|++++|+||++++++++|++|++|++|+|++.++++|++++||+++|+|+++.+|+   +||||||+++
T Consensus         1 al~~i~v~l~~~lg~~~~~l~el~~L~~G~vl~l~~~~~~~V~l~v~g~~i~~G~l~~~~~---~~av~It~li   71 (71)
T d1o9ya_           1 ALDSLALDLTLRCGELRLTLAELRRLDAGTILEVTGISPGHATLCHGEQVVAEGELVDVEG---RLGLQITRLV   71 (71)
T ss_dssp             CCTTCEEEEEEEEEEEEEEHHHHHTCCTTCEEEECSSCTTEEEEEETTEEEEEEEEEEETT---EEEEEEEEEC
T ss_pred             CCCCEEEEEEEEEECCEEEHHHHHCCCCCCEEEECCCCCCCEEEEECCEEEEEEEEEEECC---EEEEEEEEEC
T ss_conf             9542068999999200838999853589999991877899799999988999999999999---9999999919

SCOP domain information

class: All beta proteins
fold: Surface presentation of antigens (SPOA)
superfamily: Surface presentation of antigens (SPOA)
family: Surface presentation of antigens (SPOA)
domain: Structural protein HrcQ2, C-terminal domain
species: Pseudomonas syringae [TaxId: 317]