RPSBLAST alignment for GI: 254780688 and conserved domain: COG1886

>gnl|CDD|32070 COG1886, FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 136
 Score = 74.7 bits (183), Expect = 9e-15
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 31  VSSPTNNSEMLIQKNDVDNISEPISSDSNNILEKSTDNFDLIMNIPVKMQIILGSCCMQI 90
           V      ++ L+ K+  +     +    + +LE   ++ DL+++IPV++ + LG   M +
Sbjct: 27  VPGSEATADSLLYKSVKEVAFAEVELTESTVLESLNESIDLLLDIPVRLSVELGRTKMPL 86

Query: 91  SNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEI 143
             L+ L KG VI LDK  GE VDI +N + I +GE+ ++++    FGVR+ EI
Sbjct: 87  GELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVDDK---FGVRITEI 136