RPSBLAST alignment for GI: 254780688 and conserved domain: COG1886
>gnl|CDD|32070 COG1886, FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 136
Score = 74.7 bits (183), Expect = 9e-15
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 31 VSSPTNNSEMLIQKNDVDNISEPISSDSNNILEKSTDNFDLIMNIPVKMQIILGSCCMQI 90
V ++ L+ K+ + + + +LE ++ DL+++IPV++ + LG M +
Sbjct: 27 VPGSEATADSLLYKSVKEVAFAEVELTESTVLESLNESIDLLLDIPVRLSVELGRTKMPL 86
Query: 91 SNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEI 143
L+ L KG VI LDK GE VDI +N + I +GE+ ++++ FGVR+ EI
Sbjct: 87 GELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVDDK---FGVRITEI 136