HHsearch alignment for GI: 254780689 and conserved domain: PRK05934

>PRK05934 type III secretion system protein; Validated.

Probab=97.81  E-value=4.9e-05  Score=53.02  Aligned_cols=49  Identities=20%  Similarity=0.472  Sum_probs=46.3

Q ss_pred             HCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             4199899999984038647889999578889999998379899999999
Q gi|254780689|r  129 KETDPGVIADFLSKEHPQTTAYVLSMMPPSIGASVLLRFPNKIHADIMK  177 (345)
Q Consensus       129 ~~~~~~~La~~L~~EhPQtiAlILs~L~~~~Aa~VL~~Lp~e~r~ev~~  177 (345)
T Consensus       290 qgINI~KLiEi~qkESPEKi~lILSYLDpkKAeelln~LPEd~khqVLK  338 (341)
T PRK05934        290 QGINIPKLIEIMQKESPEKIALILSYLDPKKAEELLNKLPEDMKHQVLK  338 (341)
T ss_pred             CCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHH
T ss_conf             0388799999986418687658988438175999998690989887884