HHsearch alignment for GI: 254780689 and conserved domain: PRK07194

>PRK07194 fliG flagellar motor switch protein G; Reviewed.
Probab=99.16  E-value=3.1e-08  Score=74.17  Aligned_cols=178  Identities=10%  Similarity=0.147  Sum_probs=136.2

Q ss_pred             HHCCCHHHCC------HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH---HHHHHHHHHHC
Q ss_conf             4037922368------68799999998381468999851999999999999861389998999999---99999998510
Q gi|254780689|r   14 YKEISPVSLT------QKDKATAILLAMEKQVSGKLLRHFTHAELKEIVASAKLLPEISPEELEDI---IDEFESQFIAG   84 (345)
Q Consensus        14 ~~~~~p~~Lt------g~eKAAilLl~LGee~Aa~ilk~l~~~Ei~~i~~~m~~l~~i~~~~~~~v---l~EF~~~~~~~   84 (345)
T Consensus       112 L~~~dp~~La~~L~~EhPQtiAlILs~L~~~~AA~VL~~Lp~~~~~evi~Ria~l~~v~p~~i~~i~~~L~~~~~~~~~~  191 (334)
T PRK07194        112 LQWVDPQQLARLIANEHLQMQAVFLAFLPPESAAAVLKYLPEDRQDDILYRIAQLDDVDRDVVDELDELIERCLAMVLEE  191 (334)
T ss_pred             HHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             86799999999987348579999998089999999999789998999999997447899999999999999998743344


Q ss_pred             CC-CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-------CCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC
Q ss_conf             45-66534889999761149799999975441134456-------75678974199899999984038647889999578
Q gi|254780689|r   85 IG-LTENSKNIESILEEGLEQNELEKLLNKSDISQENN-------NSIWDHLKETDPGVIADFLSKEHPQTTAYVLSMMP  156 (345)
Q Consensus        85 ~~-~~g~~~~~~~lL~~al~~d~a~~ll~~~~~~~~~~-------~~~~~~L~~~~~~~La~~L~~EhPQtiAlILs~L~  156 (345)
T Consensus       192 ~~~~~~G~~~~A~IlN~~-~~~~-~~il~~L~~~d~~la~~Ir~~mF~Fedl~~l~~~~~~~ll~~v~~~~l~~ALkga~  269 (334)
T PRK07194        192 HGTKVIGVKQAADIINRF-PGDR-QQLMEMLKEHDEEVVNEIEDNMYDFFILSRQSEETLQRLMDEVPMELWAIALKGTE  269 (334)
T ss_pred             CCCCCCCHHHHHHHHCCC-CHHH-HHHHHHHHHHCHHHHHHHHHHCEEHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf             556666289999998258-5259-99999998639999999998711278753389378999986289989999984698


Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             8899999983798999999999840489998999999
Q gi|254780689|r  157 PSIGASVLLRFPNKIHADIMKRTVNLPKISPYIQKTI  193 (345)
Q Consensus       157 ~~~Aa~VL~~Lp~e~r~ev~~Ria~l~~v~~ev~~~i  193 (345)
T Consensus       270 ~e~~~~il~nmS~R~a~~l~eel~~~gpv~~~dve~A  306 (334)
T PRK07194        270 PALRQAILRVMPKRQAQALETQIERTGPVPLSRVEQA  306 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             9999999987669999999999985399868999999