HHsearch results for GI: 254780689 and protein with PDBid: 3hjl_A
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=99.10 E-value=1.4e-07 Score=68.34 Aligned_cols=183 Identities=12% Similarity=0.127 Sum_probs=137.7
Q ss_pred HHCCCHHHCC------HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH---HHHHHHHHHH-
Q ss_conf 4037922368------68799999998381468999851999999999999861389998999999---9999999851-
Q gi|254780689|r 14 YKEISPVSLT------QKDKATAILLAMEKQVSGKLLRHFTHAELKEIVASAKLLPEISPEELEDI---IDEFESQFIA- 83 (345)
Q Consensus 14 ~~~~~p~~Lt------g~eKAAilLl~LGee~Aa~ilk~l~~~Ei~~i~~~m~~l~~i~~~~~~~v---l~EF~~~~~~- 83 (345)
.+.+.|..|. .||=+|++|..|.++.|++||.+|+++....|...|++++.++|+.+..+ |.+-......
T Consensus 113 L~~~~~~~La~~L~~EhPQtiAliLs~L~~~~AA~VL~~Lp~~~r~eVv~Ria~l~~v~~~~v~~le~~L~~~l~~~~~~ 192 (329)
T 3hjl_A 113 IEKVDSRILASLLKNEHPQTIALFLSQLSPKKSAEIIQNLPEELKKEVVKRIATLENVNVQYVKELAQILLEEISSLGAK 192 (329)
T ss_dssp HHTSCHHHHHHHHTTSCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 87499899999987478159999999389999999998699988999999997447999999999999999887301210
Q ss_pred CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-------CCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC
Q ss_conf 04566534889999761149799999975441134456-------75678974199899999984038647889999578
Q gi|254780689|r 84 GIGLTENSKNIESILEEGLEQNELEKLLNKSDISQENN-------NSIWDHLKETDPGVIADFLSKEHPQTTAYVLSMMP 156 (345)
Q Consensus 84 ~~~~~g~~~~~~~lL~~al~~d~a~~ll~~~~~~~~~~-------~~~~~~L~~~~~~~La~~L~~EhPQtiAlILs~L~ 156 (345)
...-.||.+.+.++|+.. +.+.-+.+++.++-..+.. --.|+-|..+++..+..+++.=+++++++-|...+
T Consensus 193 ~~~~~~G~~~~A~ILn~~-~~~~~~~il~~l~~~d~~la~~Ir~~mF~Fedl~~l~~~~l~~ll~~v~~~~l~~ALkga~ 271 (329)
T 3hjl_A 193 EALKLEGTAVAAELLNTL-DKETRELILQSIGQEDPLLEERIREKMFTFEDIRKLSDRDIIEILKVVDKNTLMIALLGAP 271 (329)
T ss_dssp HSCCCCHHHHHHHHHHHS-CHHHHHHHHHHHHHHCHHHHHHHHHHHSCGGGGGGSCHHHHHHHHTTSCHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 011244089999998537-7788999999998628999999998623888784279889999987299889999876799
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 88999999837989999999998404899989999999999
Q gi|254780689|r 157 PSIGASVLLRFPNKIHADIMKRTVNLPKISPYIQKTIEKCI 197 (345)
Q Consensus 157 ~~~Aa~VL~~Lp~e~r~ev~~Ria~l~~v~~ev~~~ie~~L 197 (345)
++..-.+|..+|...+.-+--.|..+++++..-++.--+.+
T Consensus 272 ~e~~~~il~nms~R~a~~l~~el~~~gpv~~~~ve~Aq~~i 312 (329)
T 3hjl_A 272 EDIKQKFLSNMSKRAAKLFLEDMEALGPVKKSEIEKAQRQV 312 (329)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHTCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999875799999999999854998899999999999