HHSEARCH alignment of GI: 254780690 and SCOP domain: g3bzy.1

Alignment
>g3bzy.1 d.367.1.1 (A:246-262,B:263-345) Type III secretion proteins EscU {Escherichia coli [TaxId: 562]}
Probab=99.97  E-value=3.3e-32  Score=271.90  Aligned_cols=98  Identities=32%  Similarity=0.460  Sum_probs=95.8

Q ss_pred             HHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf             88986077686998735530788897688888888998076589999999999739978868899999997288989489
Q gi|254780690|r  256 HKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIP  335 (354)
Q Consensus       256 ~~~~~~V~~A~vvitNPTH~AVAL~Y~~~~~~aP~vvaKG~~~~A~~Ir~~A~~~~Vpive~~~LAR~Ly~~~~ig~~Ip  335 (354)
                      ++|+++|++|||||||||||||||+||+++++||+|+|||.|.+|++||++|++|||||+||++|||+||+++++|++||
T Consensus         2 g~~~~~v~~a~vvi~NPTh~AVAL~Yd~~~~~aP~VvAkG~g~~A~~I~~~A~e~gIPi~~d~~LAr~Ly~~~~ig~~IP   81 (100)
T g3bzy.1           2 GSLANNIKKSTVIVKNPTHIAICLYYKLGETPLPLVIETGKDAKALQIIKLAELYDIPVIEDIPLARSLDKNIHKGQYIT   81 (100)
T ss_dssp             CHHHHHHHHCSEEEECCCCEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHTTCCEEECHHHHHHHHHHCCTTCBCC
T ss_pred             CCHHHCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCCCCCC
T ss_conf             14444288788899789779999998689898988999718678999999999849978978999999997688989669


Q ss_pred             HHHHHHHHHHHHHHHHHC
Q ss_conf             899999999999997302
Q gi|254780690|r  336 PVFYKAVAQLIYKIYHKK  353 (354)
Q Consensus       336 ~~~y~aVA~il~~v~~lk  353 (354)
                      +++|++||+||+|+|++.
T Consensus        82 ~ely~aVAeIL~~v~~ld   99 (100)
T g3bzy.1          82 EDFFEPVAQLIRIAIDLD   99 (100)
T ss_dssp             GGGHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999632


SCOP domain information

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