BLAST/PSIBLAST alignment of GI: 254780690 and GI: 116250471 at iteration 1
>gi|116250471|ref|YP_766309.1| flagellar biosynthesis protein FlhB [Rhizobium leguminosarum bv. viciae 3841] Length = 365
>gi|115255119|emb|CAK06193.1| putative flagellar biosynthetic protein [Rhizobium leguminosarum bv. viciae 3841] Length = 365
 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 151/347 (43%), Positives = 235/347 (67%)

Query: 4   NDAPDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTSDLH 63
           +D  D+KTEAP++KK  DA  +GN P SRE S+F++ILA  IYL+FF    +  +T  L 
Sbjct: 9   DDDKDSKTEAPTAKKQSDAAEKGNVPSSRELSIFATILATFIYLVFFLPESVGRMTEMLR 68

Query: 64  VLLASATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLNHV 123
            +     Q K+E    ++ L   +  +++ LV P  +LFM+FG+ S + Q +P   L  +
Sbjct: 69  DIFEQPDQWKIETGPDVLALFVRIGWASAALVAPAFILFMVFGVASSVFQNLPTPVLERI 128

Query: 124 KPSFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISANPHS 183
           +P   R+S  +G  R++S+  LV F KS  K+++VG I+   L   YF  +D + ++P +
Sbjct: 129 RPQASRISPIKGWSRLFSVPGLVEFGKSLFKVVVVGVILFFVLRSEYFGSIDAMFSDPQT 188

Query: 184 ILYHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNPIIK 243
           IL      +RK++I++L+  A + + D+ W+ H W+++LKM++ E+K+E KQ+ G+P +K
Sbjct: 189 ILVRMMAAMRKIIIVMLIATAIVAIADLFWTRHHWFTELKMTRHEVKEENKQAQGDPFVK 248

Query: 244 NRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKM 303
           +RQ+S+ R R R +M+    RAT++I NPTHYA+ALRY + ENDAPV++AKGQ+LIA K+
Sbjct: 249 SRQRSLMRDRARRRMIANVDRATLVIANPTHYAVALRYAREENDAPVVLAKGQDLIALKI 308

Query: 304 RKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIY 350
           R+IA ++ IP+FE+P LARS+F QV I+S IP VFYKAVA+LI+++Y
Sbjct: 309 REIAEKNGIPVFEDPPLARSMFAQVSIDSVIPSVFYKAVAELIHRVY 355