RPSBLAST alignment for GI: 254780690 and conserved domain: PRK06298
>gnl|CDD|180519 PRK06298, PRK06298, type III secretion system protein; Validated. Length = 356
Score = 119 bits (299), Expect = 1e-27
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 10/344 (2%)
Query: 10 KTEAPSSKKIEDALNEGNAPISRE-ASLFSSILACLIYLLFFFSPGIYS-VTSDLHVLLA 67
KTE + K++ DA +G S++ S + I++ ++L F S + S L +
Sbjct: 4 KTEKATPKRLRDARKKGQVAKSQDFPSAITFIVS--MFLTFSLSSFFAKHLGSFLVSIFK 61
Query: 68 SATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLNHVKPSF 127
+A + V+ L + + +P L G+ + P + KP
Sbjct: 62 TAPTNHDPVV--TVYYLKNCLILILTASLPLLGAVAFVGVLVGFLIVGPTFSTEVFKPDI 119
Query: 128 KRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISANPHSIL-- 185
K+ + + +K+ + + L+ +KS +KI I+ I L +++ P
Sbjct: 120 KKFNPIDNLKQKFKVKTLIELLKSILKISGAALILYIVLKNRVPLIIETAGVPPLVTAQI 179
Query: 186 YHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNPIIKNR 245
+ K + I +F + VLD+ + H + +LKM K E+K E K + GNP IK R
Sbjct: 180 FKEILY--KAVTSIGIFFLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGR 237
Query: 246 QKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRK 305
++ IA+ A+ +++NP A+A+ Y+ + AP ++A G NL AK++
Sbjct: 238 RRQIAQEIAYEDTSSQVKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIIA 297
Query: 306 IAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKI 349
A ++ +PI LA L + IP Y+A+ +++ I
Sbjct: 298 EAEKYGVPIMRNVPLAHQLLDEGKELKFIPESTYEAIGEILLYI 341