RPSBLAST alignment for GI: 254780690 and conserved domain: PRK06298

>gnl|CDD|180519 PRK06298, PRK06298, type III secretion system protein; Validated. Length = 356
 Score =  119 bits (299), Expect = 1e-27
 Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 10/344 (2%)

Query: 10  KTEAPSSKKIEDALNEGNAPISRE-ASLFSSILACLIYLLFFFSPGIYS-VTSDLHVLLA 67
           KTE  + K++ DA  +G    S++  S  + I++  ++L F  S      + S L  +  
Sbjct: 4   KTEKATPKRLRDARKKGQVAKSQDFPSAITFIVS--MFLTFSLSSFFAKHLGSFLVSIFK 61

Query: 68  SATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLNHVKPSF 127
           +A       +   V+ L +  +      +P L      G+    +   P  +    KP  
Sbjct: 62  TAPTNHDPVV--TVYYLKNCLILILTASLPLLGAVAFVGVLVGFLIVGPTFSTEVFKPDI 119

Query: 128 KRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISANPHSIL-- 185
           K+ +  + +K+ + +  L+  +KS +KI     I+ I L      +++     P      
Sbjct: 120 KKFNPIDNLKQKFKVKTLIELLKSILKISGAALILYIVLKNRVPLIIETAGVPPLVTAQI 179

Query: 186 YHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNPIIKNR 245
           +       K +  I +F   + VLD+ +  H +  +LKM K E+K E K + GNP IK R
Sbjct: 180 FKEILY--KAVTSIGIFFLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGR 237

Query: 246 QKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRK 305
           ++ IA+             A+ +++NP   A+A+ Y+  +  AP ++A G NL AK++  
Sbjct: 238 RRQIAQEIAYEDTSSQVKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIIA 297

Query: 306 IAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKI 349
            A ++ +PI     LA  L  +      IP   Y+A+ +++  I
Sbjct: 298 EAEKYGVPIMRNVPLAHQLLDEGKELKFIPESTYEAIGEILLYI 341