RPSBLAST alignment for GI: 254780690 and conserved domain: COG1377

>gnl|CDD|31567 COG1377, FlhB, Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 363

 Score =  306 bits (785), Expect = 6e-84
 Identities = 129/352 (36%), Positives = 207/352 (58%), Gaps = 1/352 (0%)

Query: 2   SENDAPDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTSD 61
           +++ A D KTE P+ KK+ DA  +G  P SRE +  +S+L   + L FF S     ++  
Sbjct: 1   ADDMADDEKTEKPTPKKLRDAREKGQVPKSRELTSAASLLVGFLLLFFFGSYFARRLSGF 60

Query: 62  LHVLLASATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLN 121
           L   L       L+D S  + L+  L L   + ++P LL+ ++ G+ + ++Q   + +  
Sbjct: 61  LRAFLEFPESMDLDDES-ALELIKALLLEILKALLPFLLVLLVVGLLANILQVGFLFSTE 119

Query: 122 HVKPSFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISANP 181
            +KP F +++  +G+KRI+S+  LV  +KS +KI+LVG +    L  +   +L     +P
Sbjct: 120 ALKPKFSKLNPIKGLKRIFSLQTLVELLKSLLKIVLVGLVAYFVLKNHLSELLSLAGQSP 179

Query: 182 HSILYHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNPI 241
            + L      + K+L+ +LL +  +   D  +   Q+  KLKM+KQE+KDE KQS G+P 
Sbjct: 180 VAALSIFMELLGKLLLAVLLLLLIVAAFDYFYQRFQYIKKLKMTKQEVKDEYKQSEGDPE 239

Query: 242 IKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAK 301
           +K+R + + R   R +MM    +A ++ITNPTHYA+AL+Y   +  APV+VAKG +L+A 
Sbjct: 240 VKSRIRQMQREIARRRMMSDVPKADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVAL 299

Query: 302 KMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIYHKK 353
           K+R+IA EH IPI E P LAR+L++QV +   IP   YKAVA+++  +Y  K
Sbjct: 300 KIREIAKEHGIPIIENPPLARALYRQVEVGQQIPEELYKAVAEVLAYVYQLK 351