RPSBLAST alignment of GI: 254780690 and protein with PDBid: 3c01
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, membrane, inner membrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1 Length = 98
Score = 95.3 bits (237), Expect = 2e-20
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 272 PTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPIN 331
PTH + + + P++ N A +R A + +P+ + LARSLFK
Sbjct: 1 PTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRY 60
Query: 332 SAIPPVFYKAVAQLIYKIY 350
+ V +L+ +
Sbjct: 61 DLVSLEEIDEVLRLLVWLE 79