HHsearch alignment for GI: 254780693 and conserved domain: COG1342

>COG1342 Predicted DNA-binding proteins [General function prediction only].

Probab=95.10  E-value=0.056  Score=33.24  Aligned_cols=46  Identities=37%  Similarity=0.375  Sum_probs=42.2

Q ss_pred             CCCCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             444998999999999-8799978999994999889999999999980
Q gi|254780693|r  171 ARNLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       171 ~~~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
T Consensus        31 ~V~lt~eElEAlRLvD~~~l~QeeAA~rMgISr~Tfwr~l~sAR~Kv   77 (99)
T COG1342          31 PVILTIEELEALRLVDYEGLTQEEAALRMGISRQTFWRLLTSARKKV   77 (99)
T ss_pred             CEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             43522999889998868610578999984642999999999999999